Plot a heatmap with the pairwise identity percentages.

Plot a heatmap with the pairwise identity percentages.

pairwise_sequence_identity_heatmap(data, annotation = NULL)

Arguments

data

A Data Frame obtained from pairwise_alignment_sequence_identity.

annotation

A character vector with as many elements as sequences.

Value

A ggplot object

Examples

data(phmmer_2abl)
pairwise_alignment_sequence_identity(
    seqs = phmmer_2abl$hits.fullfasta[6:10],
    aln_type = "overlap",
    pid_type = "PID2"
) %>%
    pairwise_sequence_identity_histogram()
#> Warning: Removed 14 rows containing non-finite values (`stat_bin()`).